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Bioinformatics 25 (2009) 1575–1586] the main methodical organization and presentation of the waft of textual data compression for the investigation of biological data has been specified. Its major focal point was on a methodical presentation of the key areas of bioinformatics and computational biology anywhere compression has been used together with a technical presentation of how well-known notions from information theory have been adapted to productively work on biological data. Rather surprisingly, the use of data compression is pervasive in computational biology. Beginning from that one, the focus of this companion appraisal is on the computational methods engaged in the use of data compression in computational biology.
Certainly, although one would expect ad hoc adaptation of compression methods to work on biological data, unifying and homogeneous algorithmic approaches are emerging. furthermore, given that experiments based on parallel sequencing are the prospect for biological research, data compression techniques are among a handful of candidates that seem able, productively, to deal with the deluge of sequence data they produce; even though, until now, only in terms of storage and indexing, with the psychoanalysis still being a challenge. Consequently, the two reviews, balancing each other, are perceived to be a useful starting point for computer scientists to get acquainted with lots of the computational challenges coming from computational biology in which core ideas of the information sciences are already having a substantial impact.
Resource article: http://www.expertsmind.net/
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